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פותח על ידי קלירמאש פתרונות בע"מ -
Selection: A server for detecting evolutionary forces at a single amino-acid site
Year:
2005
Source of publication :
bioinformatics (source)
Authors :
דורון-פייגנבאום, עדי
;
.
Volume :
21
Co-Authors:
Doron-Faigenboim, A., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Stern, A., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Mayrose, I., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Bacharach, E., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Pupko, T., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Facilitators :
From page:
2101
To page:
2103
(
Total pages:
3
)
Abstract:
Summary: We present an algorithmic tool for the identification of biologically significant amino acids in proteins of known three dimensional structure. We estimate the degree of purifying selection and positive Darwinian selection at each site and project these estimates onto the molecular surface of the protein. Thus, patches of functional residues (undergoing either positive or purifying selection), which may be discontinuous in the linear sequence, are revealed. We test for the statistical significance of the site-specific scores in order to obtain reliable and valid estimates. © The Author 2005. Published by Oxford University Press. All rights reserved.
Note:
Related Files :
Amino Acids
Computer Graphics
computer simulation
Genetics
Models, Molecular
Molecular Evolution
molecular genetics
proteins
עוד תגיות
תוכן קשור
More details
DOI :
10.1093/bioinformatics/bti259
Article number:
Affiliations:
Database:
סקופוס
Publication Type:
מאמר
;
.
Language:
אנגלית
Editors' remarks:
ID:
23255
Last updated date:
02/03/2022 17:27
Creation date:
16/04/2018 23:57
Scientific Publication
Selection: A server for detecting evolutionary forces at a single amino-acid site
21
Doron-Faigenboim, A., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Stern, A., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Mayrose, I., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Bacharach, E., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Pupko, T., Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Selection: A server for detecting evolutionary forces at a single amino-acid site
Summary: We present an algorithmic tool for the identification of biologically significant amino acids in proteins of known three dimensional structure. We estimate the degree of purifying selection and positive Darwinian selection at each site and project these estimates onto the molecular surface of the protein. Thus, patches of functional residues (undergoing either positive or purifying selection), which may be discontinuous in the linear sequence, are revealed. We test for the statistical significance of the site-specific scores in order to obtain reliable and valid estimates. © The Author 2005. Published by Oxford University Press. All rights reserved.
Scientific Publication
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