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אסיף מאגר המחקר החקלאי
פותח על ידי קלירמאש פתרונות בע"מ -
An integrated genetic linkage map of pepper (Capsicum spp.)
Year:
2004
Source of publication :
Molecular Breeding
Authors :
בן חיים, ארנון
;
.
פארן, אילן
;
.
Volume :
13
Co-Authors:
Paran, I., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Van Der Voort, J.R., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
Lefebvre, V., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Jahn, M., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Landry, L., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Van Schrick, M., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
Tanyolac, B., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Caranta, C., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Chaim, A.B., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Livingstone, K., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Palloix, A., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Peleman, J., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
Facilitators :
From page:
251
To page:
261
(
Total pages:
11
)
Abstract:
An integrated genetic map of pepper including 6 distinct progenies and consisting of 2262 markers covering 1832 cM was constructed using pooled data from six individual maps by the Keygene proprietary software package INT_MAP. The map included: 1528 AFLP, 440 RFLP, 288 RAPD and several known gene sequences, isozymes and morphological markers. In total, 320 anchor markers (common markers in at least two individual maps) were used for map integration. Most anchor markers (265) were common to two maps, while 27, 26 and 5 markers were common to three, four and five maps, respectively. Map integration improved the average marker density in the genome to 1 marker per 0.8 cM compared to 1 marker per 2.1 cM in the most dense individual map. In addition, the number of gaps of at least 10 cM between adjacent markers was reduced in the integrated map. Although marker density and genome coverage were improved in the integrated map, several small linkage groups remained, indicating that further marker saturation will be needed in order to obtain a full coverage of the pepper genome. The integrated map can be used as a reference for future mapping studies in Capsicum and to improve the utilization of molecular markers for pepper breeding.
Note:
Related Files :
Capsicum
Embryophyta
Integrated linkage map
Molecular markers
עוד תגיות
תוכן קשור
More details
DOI :
10.1023/B:MOLB.0000022526.30914.31
Article number:
0
Affiliations:
Database:
סקופוס
Publication Type:
מאמר
;
.
Language:
אנגלית
Editors' remarks:
ID:
28241
Last updated date:
02/03/2022 17:27
Creation date:
17/04/2018 00:37
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Scientific Publication
An integrated genetic linkage map of pepper (Capsicum spp.)
13
Paran, I., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Van Der Voort, J.R., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
Lefebvre, V., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Jahn, M., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Landry, L., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Van Schrick, M., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
Tanyolac, B., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Caranta, C., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Chaim, A.B., Dept. of Plant Genetics and Breeding, Agricultural Research Organization, Volcani Center, P. O. Box 6, Bet Dagan, 50250, Israel
Livingstone, K., Department of Plant Breeding, Cornell University, Ithaca, NY 14853, United States
Palloix, A., Inst. Natl. de la Rech. Agronomique, U. Genet. d'Amelioration Fruits L., Domaine Saint-Maurice, F84143 Montfavet Cedex, France
Peleman, J., Keygene Genetics, P. O. Box 216, 6700 AE Wageningen, Netherlands
An integrated genetic linkage map of pepper (Capsicum spp.)
An integrated genetic map of pepper including 6 distinct progenies and consisting of 2262 markers covering 1832 cM was constructed using pooled data from six individual maps by the Keygene proprietary software package INT_MAP. The map included: 1528 AFLP, 440 RFLP, 288 RAPD and several known gene sequences, isozymes and morphological markers. In total, 320 anchor markers (common markers in at least two individual maps) were used for map integration. Most anchor markers (265) were common to two maps, while 27, 26 and 5 markers were common to three, four and five maps, respectively. Map integration improved the average marker density in the genome to 1 marker per 0.8 cM compared to 1 marker per 2.1 cM in the most dense individual map. In addition, the number of gaps of at least 10 cM between adjacent markers was reduced in the integrated map. Although marker density and genome coverage were improved in the integrated map, several small linkage groups remained, indicating that further marker saturation will be needed in order to obtain a full coverage of the pepper genome. The integrated map can be used as a reference for future mapping studies in Capsicum and to improve the utilization of molecular markers for pepper breeding.
Scientific Publication
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