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פותח על ידי קלירמאש פתרונות בע"מ -
Genome analysis of haplotype D of Candidatus Liberibacter solanacearum
Year:
2018
Source of publication :
Frontiers in Microbiology
Authors :
בהר, אופיר
;
.
זפו, רואן
;
.
סלע, נעה
;
.
פיאסצקי, אלון
;
.
פרייליך, שירי
;
.
קציר, לירון
;
.
Volume :
19
Co-Authors:

Garcia, D.S., Department of Entomology, Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of Jerusalem, Rehovot, Israel; Department of Plant Pathology and Microbiology, Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of Jerusalem, Rehovot, Israel; Jiang, J., Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Nanjing, China;LeZion, Israel;

Facilitators :
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Total pages:
1
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Abstract:

Candidatus Liberibacter solanacearum (Lso) haplotype D (LsoD) is a suspected bacterial pathogen, spread by the phloem-feeding psyllid Bactericera trigonica Hodkinson and found to infect carrot plants throughout the Mediterranean. Haplotype D is one of six haplotypes of Lso that each have specific and overlapping host preferences, disease symptoms, and psyllid vectors. Genotyping of rRNA genes has allowed for tracking the haplotype diversity of Lso and genome sequencing of several haplotypes has been performed to advance a comprehensive understanding of Lso diseases and of the phylogenetic relationships among the haplotypes. To further pursue that aim we have sequenced the genome of LsoD from its psyllid vector and report here its draft genome. Genome-based single nucleotide polymorphism analysis indicates LsoD is most closely related to the A haplotype. Genomic features and the metabolic potential of LsoD are assessed in relation to Lso haplotypes A, B, and C, as well as the facultative strain Liberibacter crescens. We identify genes unique to haplotype D as well as putative secreted effectors that may play a role in disease characteristics specific to this haplotype of Lso. Copyright © 2018 Katsir, Zhepu, Santos Garcia, Piasezky, Jiang, Sela, Freilich and Bahar.

Note:
Related Files :
Fastidious bacteria
genomics
Liberibacter
Plant pathogen
psyllid
עוד תגיות
תוכן קשור
More details
DOI :
Article number:
0
Affiliations:
Database:
סקופוס
Publication Type:
מאמר
;
.
Language:
אנגלית
Editors' remarks:
ID:
38688
Last updated date:
02/03/2022 17:27
Creation date:
25/12/2018 10:02
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Scientific Publication
Genome analysis of haplotype D of Candidatus Liberibacter solanacearum
19

Garcia, D.S., Department of Entomology, Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of Jerusalem, Rehovot, Israel; Department of Plant Pathology and Microbiology, Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of Jerusalem, Rehovot, Israel; Jiang, J., Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Nanjing, China;LeZion, Israel;

Genome analysis of haplotype D of Candidatus Liberibacter solanacearum

Candidatus Liberibacter solanacearum (Lso) haplotype D (LsoD) is a suspected bacterial pathogen, spread by the phloem-feeding psyllid Bactericera trigonica Hodkinson and found to infect carrot plants throughout the Mediterranean. Haplotype D is one of six haplotypes of Lso that each have specific and overlapping host preferences, disease symptoms, and psyllid vectors. Genotyping of rRNA genes has allowed for tracking the haplotype diversity of Lso and genome sequencing of several haplotypes has been performed to advance a comprehensive understanding of Lso diseases and of the phylogenetic relationships among the haplotypes. To further pursue that aim we have sequenced the genome of LsoD from its psyllid vector and report here its draft genome. Genome-based single nucleotide polymorphism analysis indicates LsoD is most closely related to the A haplotype. Genomic features and the metabolic potential of LsoD are assessed in relation to Lso haplotypes A, B, and C, as well as the facultative strain Liberibacter crescens. We identify genes unique to haplotype D as well as putative secreted effectors that may play a role in disease characteristics specific to this haplotype of Lso. Copyright © 2018 Katsir, Zhepu, Santos Garcia, Piasezky, Jiang, Sela, Freilich and Bahar.

Scientific Publication
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