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Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment
Year:
2013
Source of publication :
Metabolomics
Authors :
Burger, Joseph
;
.
Schaffer, Arthur
;
.
Tadmor, Yaakov
;
.
Volume :
9
Co-Authors:
Bernillon, S., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Biais, B., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Deborde, C., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Maucourt, M., Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Cabasson, C., Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Gibon, Y., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Hansen, T.H., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
Husted, S., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
de Vos, R.C.H., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Mumm, R., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Jonker, H., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Ward, J.L., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Miller, S.J., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Baker, J.M., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Burger, J., Newe Yaar Research Center, ARO, P. O. Box 1021, 30095 Ramat Yishay, Israel
Tadmor, Y., Newe Yaar Research Center, ARO, P. O. Box 1021, 30095 Ramat Yishay, Israel
Beale, M.H., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Schjoerring, J.K., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
Schaffer, A.A., Volcani Center, ARO, P. O. Box 6, 50250 Bet-Dagan, Israel
Rolin, D., Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Hall, R.D., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Moing, A., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Facilitators :
From page:
57
To page:
77
(
Total pages:
21
)
Abstract:
Melon (Cucumis melo L.) is a global crop in terms of economic importance and nutritional quality. The aim of this study was to explore the variability in metabolite and elemental composition of several commercial varieties of melon in various environmental conditions. Volatile and non-volatile metabolites as well as mineral elements were profiled in the flesh of mature fruit, employing a range of complementary analytical technologies. More than 1,000 metabolite signatures and 19 mineral elements were determined. Data analyses revealed variations related to factors such as variety, growing season, contrasting agricultural management practices (greenhouse vs. field with or without fruit thinning) and planting date. Two hundred and ninety-one analytes discriminated two contrasting varieties, one from the var. inodorous group and the other from the var. cantaloupensis group. Two hundred and eighty analytes discriminated a short shelf-life from a mid-shelf-life variety within the var. cantaloupensis group. Three hundred and twenty-seven analytes discriminated two seasons, and two hundred and fifty-two analytes discriminated two contrasting agricultural management practices. The affected compound families greatly depended on the factor studied. The compositional variability of identified or partially identified compounds was used to study metabolite and mineral element co-regulation using correlation networks. The results confirm that metabolome and mineral element profiling are useful diagnostic tools to characterize the quality of fruits cultivated under commercial conditions. They can also provide knowledge on fruit metabolism and the mechanisms of plant response to environmental modifications, thereby paving the way for metabolomics-guided improvement of cultural practices for better fruit quality. © 2012 Springer Science+Business Media, LLC.
Note:
Related Files :
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fruit growing
hexanoic acid ethyl ester
Israel
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Zinc
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More details
DOI :
10.1007/s11306-012-0429-1
Article number:
Affiliations:
Database:
Scopus
Publication Type:
article
;
.
Language:
English
Editors' remarks:
ID:
28786
Last updated date:
02/03/2022 17:27
Creation date:
17/04/2018 00:41
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Scientific Publication
Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment
9
Bernillon, S., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Biais, B., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Deborde, C., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Maucourt, M., Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Cabasson, C., Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Gibon, Y., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Hansen, T.H., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
Husted, S., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
de Vos, R.C.H., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Mumm, R., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Jonker, H., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Ward, J.L., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Miller, S.J., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Baker, J.M., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Burger, J., Newe Yaar Research Center, ARO, P. O. Box 1021, 30095 Ramat Yishay, Israel
Tadmor, Y., Newe Yaar Research Center, ARO, P. O. Box 1021, 30095 Ramat Yishay, Israel
Beale, M.H., The National Centre for Plant and Microbial Metabolomics, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, United Kingdom
Schjoerring, J.K., Plant and Soil Science Laboratory, Department of Agriculture and Ecology, Faculty of Science, University of Copenhagen, Frederiksberg C, 1871 Copenhagen, Denmark
Schaffer, A.A., Volcani Center, ARO, P. O. Box 6, 50250 Bet-Dagan, Israel
Rolin, D., Université Bordeaux, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Hall, R.D., Plant Research International, P. O. Box 16, 6700 AA Wageningen, Netherlands, Netherlands Metabolomics Centre, Einsteinweg 55, 2333 CC Leiden, Netherlands, Centre for BioSystems Genomics, P. O. Box 98, 6700 AB Wageningen, Netherlands
Moing, A., INRA, UMR1332 Fruit Biology and Pathology, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, Centre INRA de Bordeaux, 33140 Villenave d'Ornon, France
Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment
Melon (Cucumis melo L.) is a global crop in terms of economic importance and nutritional quality. The aim of this study was to explore the variability in metabolite and elemental composition of several commercial varieties of melon in various environmental conditions. Volatile and non-volatile metabolites as well as mineral elements were profiled in the flesh of mature fruit, employing a range of complementary analytical technologies. More than 1,000 metabolite signatures and 19 mineral elements were determined. Data analyses revealed variations related to factors such as variety, growing season, contrasting agricultural management practices (greenhouse vs. field with or without fruit thinning) and planting date. Two hundred and ninety-one analytes discriminated two contrasting varieties, one from the var. inodorous group and the other from the var. cantaloupensis group. Two hundred and eighty analytes discriminated a short shelf-life from a mid-shelf-life variety within the var. cantaloupensis group. Three hundred and twenty-seven analytes discriminated two seasons, and two hundred and fifty-two analytes discriminated two contrasting agricultural management practices. The affected compound families greatly depended on the factor studied. The compositional variability of identified or partially identified compounds was used to study metabolite and mineral element co-regulation using correlation networks. The results confirm that metabolome and mineral element profiling are useful diagnostic tools to characterize the quality of fruits cultivated under commercial conditions. They can also provide knowledge on fruit metabolism and the mechanisms of plant response to environmental modifications, thereby paving the way for metabolomics-guided improvement of cultural practices for better fruit quality. © 2012 Springer Science+Business Media, LLC.
Scientific Publication
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