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TRANSCRIPTOMIC ANALYSIS OF WHEAT ROOT IN RESPONSE TO ESSENTIAL NUTRIENT DEFICIENCY: A GEMOME-WIDE COMPARATIVE STUDY
Year:
2016
Authors :
Freilich, Shiri
;
.
Yadav, Brijesh Singh
;
.
Volume :
Co-Authors:

S Gupta,
BS Yadav,
S Freilich,
PK Varadwaj

Facilitators :
From page:
0
To page:
0
(
Total pages:
1
)
Abstract:

Plant roots are essential for providing anchorage and uptake of nutrient and water, required for growth and development. The deficiency of necessary macro-nutrients, ie Potassium (K), Magnesium (Mg), Nitrogen (N), Phosphorus (P), and Sulfate (S) in soil directs to a reduction in crop yield and growth as a resulted of change in its gene expression profile. Aim of this study is to identify and annotate such deficiency related responsible genes and proteins as well as highlights the cellular and metabolic pathways response which is essential for survival of the plant. To differentiate the gene expression levels, various nutrient deficiencies (ND) treated, microarray data of wheat root tissue sample were analyzed. To annotate the Gene Ontology (GO) term for each nutrient deficiency response genes (NDRGs), Singular Enrichment Analysis (SEA) was performed. 

Note:
Related Files :
Nutrient deficiency
nutrient deficiency response genes (NDRGs)
Wheat root
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DOI :
Article number:
0
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Publication Type:
Conference paper
;
.
Language:
English
Editors' remarks:
ID:
55031
Last updated date:
02/03/2022 17:27
Creation date:
19/05/2021 23:32
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Scientific Publication
TRANSCRIPTOMIC ANALYSIS OF WHEAT ROOT IN RESPONSE TO ESSENTIAL NUTRIENT DEFICIENCY: A GEMOME-WIDE COMPARATIVE STUDY

S Gupta,
BS Yadav,
S Freilich,
PK Varadwaj

Plant roots are essential for providing anchorage and uptake of nutrient and water, required for growth and development. The deficiency of necessary macro-nutrients, ie Potassium (K), Magnesium (Mg), Nitrogen (N), Phosphorus (P), and Sulfate (S) in soil directs to a reduction in crop yield and growth as a resulted of change in its gene expression profile. Aim of this study is to identify and annotate such deficiency related responsible genes and proteins as well as highlights the cellular and metabolic pathways response which is essential for survival of the plant. To differentiate the gene expression levels, various nutrient deficiencies (ND) treated, microarray data of wheat root tissue sample were analyzed. To annotate the Gene Ontology (GO) term for each nutrient deficiency response genes (NDRGs), Singular Enrichment Analysis (SEA) was performed. 

Scientific Publication
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